The transcriptional landscape of the developmental switch from regular pollen maturation towards microspore-derived plant regeneration in barley

Nowicka, A., Kovacik, M., Maksylewicz, A., Kopeć, P., Dubas, E., Krzewska, M., Springer, A., Hoffie, R.E., Daghma, D.S., Milec, Z., Pecinka, A., Kumlehn, J., Żur, I.
CROP JOURNAL 12: 1064-1080, 2024

Klíčová slova:
Abstrakt: Plant formation from in vitro-cultivated microspores involves a complex network of internal and environmental factors. Haploids/doubled haploids (DHs) derived from in vitro-cultured microspores are widely used in plant breeding and genetic engineering. However, the mechanism underlying the developmental switch from regular pollen maturation towards microspore-derived plant regeneration remains poorly defined. Here, RNA-sequencing was employed to elucidate the transcriptional landscapes of four early stages of microspore embryogenesis (ME) in barley cultivars Golden Promise and Igri, which exhibit contrasting responsiveness to microspore-derived plant formation. Our experiments revealed fundamental regulatory networks, specific groups of genes, and transcription factor (TF) families potentially regulating the developmental switch. We identified a set of candidate genes crucial for genotype-dependent responsiveness/ recalcitrance to ME. Our high-resolution temporal transcriptome atlas provides an important resource for future functional studies on the genetic control of microspore developmental transition.
DOI: 10.1016/j.cj.2024.07.003
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Autoři z ÚEB: Martin Kovačik, Anna Nowicka, Aleš Pečinka